Journal: Nucleic Acids Research
Article Title: Mitochondrial DNA replication is regulated by endoplasmic reticulum-mitochondrial contact sites, the mitochondrial calcium uniporter, and manganese
doi: 10.1093/nar/gkag233
Figure Lengend Snippet: Gene-silencing of Superoxide dismutase 2 inhibits mtDNA replication and is rescued by manganese. ( A ) si SOD2 or non-target (NT) silenced human fibroblasts were labelled with BrdU for 8 h and immunostained with anti-BrdU (green) and anti-TOMM20 (red). Scale bar = 50 µm. ( B ) Isolated protein from fibroblasts was immunoblotted for SOD2 after fractionation by SDS–PAGE, and quantified relative to VCL ( n = 4 independent experiments). ( C ) Quantification of the cytoplasmic BrdU foci per cell in 131 control (Ctrl) cells and 131 control cells supplemented with 50 µM MnCl 2 for 16 h, P = .89. 131 Ctrl versus 119 si SOD2 cells P = .03; and 119 si SOD2 cells versus 137 si SOD2 + Mn 2+ cells P = .03 ( n = 4 independent experiments). ( D ) EdU pulse-chase in primary human fibroblasts after transfection with siNT, si RTN4 , or si SOD2 . The EdU pulse was 26 h, and EdU incorporation in cytoplasmic foci was measured after chases of 0, 4, and 24 h. The chart represents the quantification of the EdU foci per cell in 26 non-target (NT) cells, 31 si RTN4 and 28 si SOD2 cells after a EdU pulse of 26 h (no chase); 46 NT cells, 57 si RTN4 , and 52 si SOD2 cells after a 4-h chase; and 41 NT, 36 si RTN4 , and 30 si SOD2 cells after a 24-h chase ( n = 3 independent experiments).
Article Snippet: All chemicals, unless otherwise stated, were purchased from Sigma–Aldrich with respective CAS number: thapsigargin (67526-95-8), tunicamycin (11089-65-9), 5-bromo-2′-deoxyuridine (BrdU) (59-14-3), 5-ethynyl-2′-deoxyuridine (EdU) (61135-33-9), EdU Click-it ® Thermo Fisher ( C10337 ), MCU-i4 (HY-138620, MedChemExpress), MnCl 2 (13446-34-9), cyclohexamide (66-81-9), actinonin (13434-13-4), HPG Click-it ® Thermo Fisher ( C10186 ).
Techniques: Isolation, Fractionation, SDS Page, Control, Pulse Chase, Transfection